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giovedì 18 ottobre 2018

Articolo scientifico: "Evidence of polygenic adaptation to high altitude from Tibetan and Sherpa genomes"



Un recente lavoro pubblicato su Genome Biology and Evolution, a cui ho dato un mio contributo quale socio Ex-Plora e IsIPU.

https://doi.org/10.1093/gbe/evy233

Abstract:
Although Tibetans and Sherpa present several physiological adjustments evolved to cope with selective pressures imposed by the high altitude environment, especially hypobaric hypoxia, few selective sweeps at a limited number of hypoxia related genes were confirmed by multiple genomic studies. Nevertheless, variants at these loci were found to be associated only with downregulation of the erythropoietic cascade, which represents an indirect aspect of the considered adaptive phenotype. Accordingly, the genetic basis of Tibetan/Sherpa adaptive traits remains to be fully elucidated, in part due to limitations of selection scans implemented so far and mostly relying on the hard sweep model.
In order to overcome this issue, we used whole genome sequence data and several selection statistics as input for gene network analyses aimed at testing for the occurrence of polygenic adaptation in these high-altitude Himalayan populations. Being able to detect also subtle genomic signatures ascribable to weak positive selection at multiple genes of the same functional subnetwork, this approach allowed us to infer adaptive evolution at loci individually showing small effect sizes, but belonging to highly interconnected biological pathways overall involved in angiogenetic processes.
Therefore, these findings pinpointed a series of selective events neglected so far, which likely contributed to the augmented tissue blood perfusion observed in Tibetans and Sherpa, thus uncovering the genetic determinants of a key biological mechanism that underlies their adaptation to high altitude.

Vedi anche qui: https://www.researchgate.net/publication/328360018_Evidence_of_polygenic_adaptation_to_high_altitude_from_Tibetan_and_Sherpa_genomes

sabato 27 gennaio 2018

Articolo scientifico: "The genomic landscape of Nepalese Tibeto-Burmans reveals new insights into the recent peopling of Southern Himalayas"

Nature, Scientific Reports, 7 (2017), 2045-2322.



Un recente lavoro pubblicato su Scientific Report, rivista del gruppo Nature, a cui ho dato un mio contributo quale socio Ex-Plora e IsIPU.

https://www.nature.com/articles/s41598-017-15862-z

Lo studio, condotto presso il Laboratorio di Antropologia Molecolare del Dipartimento di Scienze Biologiche Geologiche e Ambientali dell’Alma Mater di Bologna, ha analizzato il patrimonio genetico delle popolazioni di origine est asiatica che abitano le valli di media e alta quota del versante nepalese dell’Himalaya (dei Tamang che vivono a circa 2000 metri di altitudine e degli Sherpa della Rolwaling Valley che vivono ad oltre 3600 metri di altitudine), con l’obiettivo di ricostruirne la storia biologica e demografica.
In particolare, il popolo Sherpa della Rolwaling Valley oggetto del presente studio è il candidato ideale per svelare come l’uomo sia stato capace di adattarsi all’ipossia ipobarica, la riduzione della disponibilità di ossigeno ad alta quota.
Lo studio potrà dare importanti aiuti anche in campo medico.

Vedi anche qui:
https://www.researchgate.net/publication/321057712_The_genomic_landscape_of_Nepalese_Tibeto-Burmans_reveals_new_insights_into_the_recent_peopling_of_Southern_Himalayas